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@bzhanglab

Zhang Lab

Translating omics data into biological insights.

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  1. OmicsEV OmicsEV Public

    A tool for large scale omics datasets evaluation

    R 23 4

  2. WebGestaltR WebGestaltR Public

    R package for WebGestalt

    R 37 14

  3. sumer sumer Public

    SUmmarizing Multiple Enrichment analysis Results

    R 9 4

  4. neoflow neoflow Public

    NeoFlow: a proteogenomics pipeline for neoantigen discovery

    Nextflow 26 12

  5. NetSAM NetSAM Public

    Network Seriation And Modularization R package

    R 3 3

Repositories

Showing 10 of 47 repositories
  • PepQueryMHC Public

    PepQueryMHC: Rapid and Comprehensive Tumor Antigen Prioritization from Immunopeptidomics Data

    bzhanglab/PepQueryMHC’s past year of commit activity
    Java 3 GPL-3.0 0 2 0 Updated Dec 24, 2025
  • WebGestaltR Public

    R package for WebGestalt

    bzhanglab/WebGestaltR’s past year of commit activity
    R 37 14 15 1 Updated Dec 5, 2025
  • webgestaltpy Public

    Python package for WebGestalt

    bzhanglab/webgestaltpy’s past year of commit activity
    Rust 2 GPL-3.0 0 1 0 Updated Nov 26, 2025
  • xlranker Public

    prioritization tool for ppi-xl data

    bzhanglab/xlranker’s past year of commit activity
    Python 1 MIT 0 1 0 Updated Nov 26, 2025
  • funmap Public

    generate gene co-function networks using omics data

    bzhanglab/funmap’s past year of commit activity
    Python 8 MIT 4 3 1 Updated Nov 26, 2025
  • DeepMVP Public
    bzhanglab/DeepMVP’s past year of commit activity
    Python 21 GPL-3.0 2 2 0 Updated Oct 3, 2025
  • nf-docker Public

    docker files for pipeline steps

    bzhanglab/nf-docker’s past year of commit activity
    R 0 1 0 0 Updated Aug 2, 2025
  • metasage Public

    feature importance to identify interesting analytes

    bzhanglab/metasage’s past year of commit activity
    Python 1 0 0 0 Updated Jul 28, 2025
  • customprodbj Public
    bzhanglab/customprodbj’s past year of commit activity
    Java 3 GPL-3.0 5 0 1 Updated Jul 12, 2025
  • webgestalt_rust Public

    Rust implementation of WebGestalt

    bzhanglab/webgestalt_rust’s past year of commit activity
    Rust 4 Apache-2.0 0 1 0 Updated Apr 8, 2025
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