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<code>samtools merge</code> multi-thread mode

Status: Open.

#200 In elsasserlab/minute;

· nimarafati opened on Dec 12, 2025

Automatically gathering relevant metadata for an issue report

Status: Open.

#192 In elsasserlab/minute;

· cnluzon opened on Oct 31, 2024

Optimize minute environment setup

Status: Open.

#190 In elsasserlab/minute;

· cnluzon opened on Jul 4, 2024

Rename percentage duplication field

Status: Open.

#187 In elsasserlab/minute;

· cnluzon opened on Apr 5, 2024

Adjust INRC barplots size for large runs

Status: Open.

#177 In elsasserlab/minute;

· cnluzon opened on Feb 14, 2024

Make minute generate bowtie2 index if no index is found

Status: Open.

#162 In elsasserlab/minute;

· cnluzon opened on Feb 22, 2023

Fragment length parameter not so necessary for bigWig generation

Status: Open.

#161 In elsasserlab/minute;

· cnluzon opened on Jan 18, 2023

BAM file remove unmapped reads

Status: Open.

#156 In elsasserlab/minute;

· simonelsasser opened on Aug 3, 2022

wrapped snakemake run on cluster mode inherits max ncores from scheduler process

Status: Open.

#155 In elsasserlab/minute;

· cnluzon opened on Jul 5, 2022

Add copy number analysis for input

Status: Open.

#124 In elsasserlab/minute;

· simonelsasser opened on Oct 27, 2021

option to regenerate bw files with custom parameters

Status: Open.

#106 In elsasserlab/minute;

· simonelsasser opened on May 20, 2021

Group jobs have non-identificative names

Status: Open.

#96 In elsasserlab/minute;

· cnluzon opened on Dec 4, 2020